Timeline for How to add double bonds to hexagons when creating a graphene layer in VMD? [closed]
Current License: CC BY-SA 4.0
7 events
| when toggle format | what | by | license | comment | |
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| Jan 14, 2022 at 2:27 | history | closed | Tyberius♦ | Needs details or clarity | |
| Jan 14, 2022 at 2:27 | comment | added | Tyberius♦ | This question appears to be abandoned. It can be reopened if the OP addresses questions/suggestions in the comments or anyone else wants to give an answer. | |
| Nov 18, 2021 at 6:14 | history | edited | Nike Dattani - No Free Time | CC BY-SA 4.0 |
edited title
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| Nov 14, 2021 at 18:16 | comment | added | Orr22 | Maybe hte tutorial of Andrea Minoia can help, it has example x2top files and you might only need an xyz file of the CNT, not a pdb: chembytes.wikidot.com/grocnt#toc1 | |
| Nov 10, 2021 at 15:22 | comment | added | Tyberius♦ | Have you also used the TopoTools plugin to add bond information? From the VMD page for the Nanotube/Graphene builder: "The plugin itself only computes the carbon atom positions according to the provided input, but then has the option to generate further topology information suitable for classical force field MD simulations, which can then be stored in files of a suitable format. This uses functionality provided by the TopoTools plugin..." | |
| S Nov 10, 2021 at 14:45 | review | First questions | |||
| Nov 10, 2021 at 16:26 | |||||
| S Nov 10, 2021 at 14:45 | history | asked | Night Shade | CC BY-SA 4.0 |