Based on HK's two theorems, the density functional theory was built. Because one can't find the universal energy functional $F_{HK}[n(r)]$, Kohn and Sham further proposed the Kohn-Sham ansatz: mapping the interacting many-electron system to a noninteracting many-electron system (KS reference system) by keeping the ground-state electron density fixed. With that, the kinetic energy functional can be expressed with the help of the KS reference system. The variation of total energy functional respect to density $n(r)$ will result in the famous single-particle Schr$\ddot{\text{o}}$dinger-like equation (KS equation):
$$\tag{1}\left[ -\dfrac{1}{2}\nabla^2+V_{ext}+V_{hartree}+V_{xc} \right]\psi_i(\vec{r})=E_i\psi_i(\vec{r})$$
This equation is derived based on the KS reference system, which is a noninteracting one. Then what does the $V_{hartree}$ term describe? Does it still describe the electron-electron interaction of the original interacting many-electron system? If so, how can we say that the KS equation is describing a noninteracting many-electron system? Or more directly:
What's the difference for the Hartree term between the original interacting many-electron system and the noninteracting KS reference system?