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Is there a software/standalone tool that can perform energy minimization of a large number of protein-dna complex models (more than 1000)?

I know of GROMACS or Chimera or the online servers but is there a downloadable tool which I can use to minimize all the complexes and say for example, include in my script for further processing of said models?

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  • $\begingroup$ If you only wants to do geometry optimization, OpenBabel can do that using different force fields. $\endgroup$
    – Camps
    Commented Oct 4, 2022 at 18:43

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Camps wrote:

"If you only want to do geometry optimization, OpenBabel can do that using different force fields."

This Community Wiki answer can be deleted if someone wants to write a more detailed answer.

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