All Questions
4 questions
4
votes
1
answer
50
views
Defining coordinates using Vector3
I am trying to implement a tether restraint in the MM region of my QM/MM calculation using pDynamo (CHARMM/ORCA interface). I need to define the origin as a Vector3. Does anyone know how to do this?
- 1,546
10
votes
1
answer
135
views
Constraining a set of atoms in the MM region using pDynamo (CHARMM/ORCA interface)
I am trying to perform a QM/MM optimization in which my substrate is in the MM region. However when this happens there are significant changes to the geometry (undesired). I want to avoid fixing all ...
- 1,546
7
votes
1
answer
133
views
How to localize orbitals in pDynamo (CHARMM/ORCA interface)?
Does anyone know how to localize orbitals in pDynamo (CHARMM/ORCA interface). I am trying to identify the correct orbitals to swap for my high-spin iron(IV) system.
- 1,546
10
votes
1
answer
231
views
How to swap orbitals in ORCA?
I am trying to swap orbitals for a high-spin iron(IV) complex. The orbitals that correspond to the iron are not in any of the SOMOs.
I am using the pDynamo QM/MM program, which is an interface for ...
- 1,546