6 votes

How to visualize a slice of the unit cell?

I recently used OVITO for this same visualization. There is an option, Slice, within the quick command search that is available in the free version. You can use it ...
T. A.'s user avatar
  • 113
3 votes

How to get displacements along VASP NEB trajectory?

This is easy. You can simply use ase.geometry.find_mic: ...
Shaun Han's user avatar
  • 1,845
2 votes

Ovito dislocation analysis

While it seems like other modifiers can accept this argument, from the ovito python docs, it looks like only_selected needs to be specified as a property. Try ...
Tyberius's user avatar
  • 15.5k
1 vote

How to visualize a slice of the unit cell?

In VMD, under "Representations", you can use Cartesian coordinates (among many other options) to select the atoms you want to visualise. For example, ...
Shern Ren Tee's user avatar

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