user366312

Member for 2 years, 4 months
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monte-carlo

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Questions

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8

Difference between Statistical Physics, Statistical Mechanics, and Molecular Modeling?

Apr 29

7

What does it mean by "transferable" in the case of a force field?

May 21, 2022

6

How are tertiary protein structures represented in computers?

Jul 20, 2021

6

What is the fundamental difference between the Ising and Potts models?

Sep 17, 2022

6

Does Bioinformatics have any relationship with protein modeling and simulation?

Mar 4

Answers

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8

How to choose between Molecular Dynamics and Monte Carlo when beginning to simulate either equilibrium or non-equilibrium systems?

May 29

3

Scales for simulation

Jul 5, 2022

1

From a PDB file, how may I know which atoms have bonds between them?

Oct 1

0

What does it mean by "scale mismatch" and "bridging of scales"?

Jul 25, 2022

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monte-carlo

8

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20

posts

molecular-dynamics

8

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14

posts

molecular-mechanics

8

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1

post

multiscale-modeling

3

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6

posts

atomistic-simulation

0

Score

22

posts

Reputation

+50

Plot MSD (mean square displacement) versus time for a polymer chain

+10

Why do we need to find minimum energy in a protein chain?

+10

Which MD software is preferable for protein simulation?

+10

Method for Energy Computation of Protein Structures

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